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The online help provided with Application Developer has detailed information about the following topics:

Java development tools (JDT) debugger

Java and mixed language debugger

J2EE/Web application debugging

Jython debugger

XSLT debugger

Debug extensions for Rational Team Concert Client

DB2 stored procedure debugger

SQLJ debugger

See the following Web sites for Rational Team Concert topics:

Installing Rational Debug Extensions for Rational Team Concert Client:
http://publib.boulder.ibm.com/infocenter/radhelp/v7r5/topic/com.ibm.
debug.team.client.ui.doc/topics/cbtovrvw.html

Installing Rational Debug Extensions for Rational Team Concert Server:
http://publib.boulder.ibm.com/infocenter/radhelp/v7r5/index.jsp?topi
c=/com.ibm.rad.install.doc/topics/t_install_teamdebug.html

Rational Team Concert InfoCenter:
http://publib.boulder.ibm.com/infocenter/rtc/v1r0m0/index.jsp

Finally, IBM developerWorks has a number of tutorials and articles to explain debugging for various situations, including the following topics:

Debugging and Testing Java Applications:
http://www.ibm.com/developerworks/edu/i-dw-r-radcert2556.html

Getting Started with the New Rational Application Developer XSLT Debugger:
http://www-128.ibm.com/developerworks/rational/library/05/614_debug/
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